PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR92783.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NF-YB

Protein Properties

Length: 198aa MW: 22498.9 Da PI: 7.3235

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR92783.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	175.9	3.9e-55	41	136	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 r+qdrflPianv+rimkk++P+n+k+skdaketvqecvsefisfvt+easdkcqrekrktingddl+wa++tlGf+dyv+plk+yl ky+elegek RWR92783.1 41 RDQDRFLPIANVGRIMKKAIPSNGKVSKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLIWAITTLGFDDYVNPLKLYLLKYKELEGEK 136 89*******************************************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence
MEDESHVHGP IRGSPESSPH SDNNKNSNAK NIGNSSSSNN RDQDRFLPIA NVGRIMKKAI 60 PSNGKVSKDA KETVQECVSE FISFVTGEAS DKCQREKRKT INGDDLIWAI TTLGFDDYVN 120 PLKLYLLKYK ELEGEKLTIP KQHHQEQAPP TPQQQQQQHQ HHNMVQLDSS QHSLLYANQP 180 FSMPFSPQQQ QNDPRGRW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	2e-50	NF-YB family protein