PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR92792.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 253aa MW: 28883.7 Da PI: 6.3642

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR92792.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	123.2	2.2e-38	68	185	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrF Ptdeel+ ++L +k+++++++ ++i+++d+ ++Pw+L+ k+ +++++wyfF + +nr+ ++gyWk g d+++ls ++++ RWR92792.1 68 LPPGFRFYPTDEELILHFLYRKAAHQPCHP-NTIPDLDLDCYDPWELNGKALEGDNKWYFFNHV--------TQNRVSTNGYWKVLGVDEPILS-GSRT 156 79***********************999.78**********97777889**986........46899999**********.99 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vglkk Lvfy g+ap+g kt+Wvmhe++l RWR92792.1 157 VGLKKCLVFYIGEAPEGIKTNWVMHEFHL 185 ***************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MKASSDHLQS HVNLFFVLFI PSLYKYKTHH TNIHTKKIKT TYTHLSLSLS LSLSLSLFKD 60 MGEDNINLPP GFRFYPTDEE LILHFLYRKA AHQPCHPNTI PDLDLDCYDP WELNGKALEG 120 DNKWYFFNHV TQNRVSTNGY WKVLGVDEPI LSGSRTVGLK KCLVFYIGEA PEGIKTNWVM 180 HEFHLLDCGS TGSSRSSRRK GKPRMVSNEW VLCRVSETNC SSQGSCCDEE SELSCLDEVF 240 LSLDDLDEIS LPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64530.1	3e-65	NAC family protein