PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR92824.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 230aa    MW: 25303 Da    PI: 7.1804
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR92824.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.45.4e-08131171954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR++i +++  L++l+P        K++ a++L +A++Y+k L
  RWR92824.1 131 ARHRREKISERIRILQRLVPGG-----MKMDTASMLDEAIRYVKFL 171
                 699*****************96.....6****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MDGCSSSWDM AMGNQCPIHP LPFEVLNSMK DPLQAHCLPS SSHVLYSSIG IHEIPPPPLP  60
PPISSNRVSN SSFSIEHKGN NIEGGEEELC AMKEMMYKIA VMQPVDIDPA TIQKPKRRNV  120
RISDDPQSVA ARHRREKISE RIRILQRLVP GGMKMDTASM LDEAIRYVKF LKRQVKELQI  180
GQQSPHGGPV ATGNWQIGPI DIGSSSSLGP PGGARFDLPE MANVTNFSDQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00120.19e-48bHLH family protein