PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR92860.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 258aa    MW: 27658.8 Da    PI: 5.588
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR92860.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-183079255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +ykGVr ++ +g+Wv+eIr p   ++++r++lg++ t+e Aa+a++aa ++l+g
  RWR92860.1 30 KYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYATPEAAARAYDAALLCLKG 79
                8*****998.**********9...336************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MVKKSNNGSV GVEDKIQSNL PKTMPCQRRK YKGVRMRSWG SWVSEIRAPN QKTRIWLGSY  60
ATPEAAARAY DAALLCLKGS SADLNFPITP STHFTDTLMS PKSIQRAAAA AANSATSPLP  120
PLPPPPSSSS SSSSPSSPLD DHNNISTPCS GTCTAIKVEE DLQSPTPPPP PPSSSSTPSP  180
SSPSNDQGDT STPYSRNHTA TKIEDPHCSI DPWIDFDGLQ SLKCVDQVLN GCNLFDHLVM  240
GECEEEGDMG DIHLWSFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.11e-29ERF family protein