PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR92948.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family Nin-like
Protein Properties Length: 191aa    MW: 22012.3 Da    PI: 10.5541
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR92948.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK85.35.5e-2764113352
      RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                 ++i l dl+kyF+lpi +AA++L+++lTvLK++CR++GI+RWPhRkiksl
  RWR92948.1  64 ASIALTDLAKYFDLPIVEAARNLKIGLTVLKKKCREFGIPRWPHRKIKSL 113
                 6899********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MDGESKRDSY HSTPLVPMFH QYYQSPHPIV APGGPGLFKN QEINQHLPEA MVKQKRRAAT  60
DHVASIALTD LAKYFDLPIV EAARNLKIGL TVLKKKCREF GIPRWPHRKI KSLDTLIHDL  120
SEEAAKQERV NQAGAKAVTK RQKMLEREKE GIEQQPFMEI RSETKRFRQD VFKQRHMARA  180
RKNTTTNSSD V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.11e-57Nin-like family protein