PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR93008.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 333aa    MW: 37362 Da    PI: 6.5149
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR93008.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.74.6e-21147197256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+ge
  RWR93008.1 147 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRGE 197
                 59******9.**********965...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MSEKVETQQD PRSLYKAQIP SEESSCKHWN LLSKVLPPPL LLLSTPCHLS YSSSPSYPTS  60
DGCSTSTTQP SFQGFTTYDH QLGLDPNYSI GLNHLNPSQM QQIQAQILLQ QHQQQQMALQ  120
NLRQWQFLGP RVAPMKQVGS PPKPTKLYRG VRQRHWGKWV AEIRLPKNRT RLWLGTFDTA  180
EEAALAYDKA AYKLRGEFAR LNFPHLRHQE APLGGEFGAY RPLQSSVDAK LQAICQSLGD  240
NSQKQGKSES PVAAKKQPPA DVSKPEMGLL EEVKVETSSP PLSVTSESDE SAGYSPDSDI  300
KFPDFNEPPW DESESFLLQK FPSLEIDWEA ILS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.18e-63ERF family protein