PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR93087.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 281aa MW: 32513.9 Da PI: 10.1234

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR93087.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.1	5.3e-15	25	69	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT++Ed++l + ++ +G+++W++Ia+++ +t qc+ rw++yl RWR93087.1 25 TWTPQEDDILREQIRIHGTESWTSIAARFK-DKTSRQCRRRWYTYL 69 6**************************9.***********97 PP
2	Myb_DNA-binding	47.1	5.6e-15	75	118	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+WT+eEd +l +a k +G++ W+ Ia+ + gRt++ +k+r+ + RWR93087.1 75 KGSWTEEEDMILCEAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFST 118 799*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MQAMQQLQDA PKFDSSKQKD RRIVTWTPQE DDILREQIRI HGTESWTSIA ARFKDKTSRQ 60 CRRRWYTYLN SECKKGSWTE EEDMILCEAQ KIFGNRWTEI AKVVSGRTDN AVKNRFSTLC 120 KKRAKLEALS KENNHEYINQ NNKRVIIQDR FITPGTLEST AHLKKMRTNI SDPTTNCNMK 180 QRQLGEHGIE KQMHLRPPLA VLVQNSNAGN KPTQQHLINP SKVAMDDVSN NKDQGMFLKR 240 DDPKITALMQ QAELLSSLAQ KVNSENTSQS IENAWKVRDI N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14350.1	1e-94	MYB family protein