PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR93106.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB
Protein Properties Length: 328aa    MW: 36906.7 Da    PI: 8.3578
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR93106.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.32.7e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +lv ++++ G g+W++++++ g+ R+ k+c++rw +yl
       RWR93106.1 14 KGPWTPEEDIILVTYIQENGAGNWRAVPAKTGLLRCSKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding483e-1567112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T+ E++ ++++ ++lG++ W++Ia++++  Rt++++k++w+++l
       RWR93106.1  67 RGNFTENEEKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 112
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MGRPPCCEKM GTKKGPWTPE EDIILVTYIQ ENGAGNWRAV PAKTGLLRCS KSCRLRWTNY  60
LRPGIKRGNF TENEEKMIIH LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKLKKLQ  120
TGLEGHMKDG YSSLQPISKG QWERRLQTDI HMAKQALCEA LSMEKPDHHV DLKPSVSSYS  180
STRSIQSLST YAWSTDNVSR LLEGWMKNPP KRRGKSSETN IRSHNITTRE DSSSSEGTPC  240
VANNTLSPEA LESLLTFDSS TPDTSQSVSL DKTGNYGSDA VPFQAERKPK LEVPAPLTML  300
EKWLFGEGVG QGQDELIDLH LDETDVLF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1210216PKRRGKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28910.12e-96MYB family protein