PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR93108.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ZF-HD
Protein Properties Length: 279aa    MW: 30590.8 Da    PI: 7.1536
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR93108.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer103.31.6e-324096358
  ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRreve 58
                 + +YkeCl+NhAaslGgha+DGC+Efmps+ ++ +++++lkCaACgCHRnFHRr+ +
   RWR93108.1 40 QPHYKECLRNHAASLGGHALDGCCEFMPSPLSSpSDPSSLKCAACGCHRNFHRRDDD 96
                 679***************************9999********************976 PP
2Homeobox14.75.2e-05160216153
                 TT--SS--HHHHHHHHHHHH....HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
    Homeobox   1 rrkRttftkeqleeLeelFe....knrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                 +r Rt+ft+eq e ++el e    k r+ ++   eeL k++g+ +++ kvW +N + 
  RWR93108.1 160 KRFRTKFTREQKEKMQELSErlgwKMRKQDEGLVEELCKEIGVGKDVFKVWMHNNKS 216
                 789****************9887779999999**********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MLQNDNSVME TPLRPKPLSF TNGALKRHPT TTTTIITTKQ PHYKECLRNH AASLGGHALD  60
GCCEFMPSPL SSPSDPSSLK CAACGCHRNF HRRDDDADGD DDDDNDDHPR SQNQNPTSPS  120
PLTLSAPHML LALSAGGHST PPTHDETNGG VNTVAMVARK RFRTKFTREQ KEKMQELSER  180
LGWKMRKQDE GLVEELCKEI GVGKDVFKVW MHNNKSTFMK RDSNNNNIIH GDNNVKDDGA  240
VMMTVNNNNS TTTTNNCNGN GNGNGSSNTH LMNGSSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15210.13e-52ZF-HD family protein