PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR93115.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

Dof

Protein Properties

Length: 509aa MW: 55630.6 Da PI: 5.7949

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR93115.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.5	7e-39	143	202	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+l+cprC+s +tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s RWR93115.1 143 PDKILPCPRCNSLDTKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKNKSS 202 7899*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 509 aa Download sequence
MNQMSETRDP AIKLFGKTIA VPTPEDITSA LADDQDHPPS SLKTRMMMSH EQGEEEEEDE 60 EEEKDIPNKI NEDEDEDEDQ DQVTQNAEED SIECDTCSVI NENPPKTPSI EKEITTSKAT 120 KKAQEEQSET TSIAKEKAII KKPDKILPCP RCNSLDTKFC YYNNYNVNQP RHFCKKCQRY 180 WTAGGTMRNV PVGAGRRKNK SSAPHARHIT ASEALGTHMH DPPIKPNGTI LSFGMEMDAP 240 LCESMASVLK IAQKNMQGSH RNGFHAGAGA EAEAAAIARF PVPCGNGEDH SGGSSAVLSS 300 TEEGNRLNLQ EPATHNCHHG FPTQIPYFPG APWNYPWNSS AQWSSPLPPP PPAFCGSSFP 360 MPFYPTGPYW GCHMPGTWSV PWPPPLSSSP NTGSSVSASN SPSLGKHSRE GNACDHPEKT 420 DASKQGNSER GVWIPKTLRI DDPDEAAKSS IWATLGIKND RSDGTIKGAG LFKAFQPKTD 480 EKNHTMGASQ VLHANPAAMS RSRNFHESS

Sequence ? help Back to Top

Protein Sequence Length: 509 aa Download sequence

MNQMSETRDP AIKLFGKTIA VPTPEDITSA LADDQDHPPS SLKTRMMMSH EQGEEEEEDE  60
EEEKDIPNKI NEDEDEDEDQ DQVTQNAEED SIECDTCSVI NENPPKTPSI EKEITTSKAT  120
KKAQEEQSET TSIAKEKAII KKPDKILPCP RCNSLDTKFC YYNNYNVNQP RHFCKKCQRY  180
WTAGGTMRNV PVGAGRRKNK SSAPHARHIT ASEALGTHMH DPPIKPNGTI LSFGMEMDAP  240
LCESMASVLK IAQKNMQGSH RNGFHAGAGA EAEAAAIARF PVPCGNGEDH SGGSSAVLSS  300
TEEGNRLNLQ EPATHNCHHG FPTQIPYFPG APWNYPWNSS AQWSSPLPPP PPAFCGSSFP  360
MPFYPTGPYW GCHMPGTWSV PWPPPLSSSP NTGSSVSASN SPSLGKHSRE GNACDHPEKT  420
DASKQGNSER GVWIPKTLRI DDPDEAAKSS IWATLGIKND RSDGTIKGAG LFKAFQPKTD  480
EKNHTMGASQ VLHANPAAMS RSRNFHESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	5e-89	Dof family protein