PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR93178.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 87aa    MW: 10441.7 Da    PI: 4.8155
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR93178.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.28.7e-092969345
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     ++T++E++l+++  ++ G + W++Ia +++ gR ++++  +w+
       RWR93178.1 29 NMTEQEEDLIYRMYRLVGDR-WALIAGRIP-GRKPEEIERFWL 69
                     68****************99.*********.***********7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    
MDNKRRRKEP KTSNQDSEEV SSIEWEIVNM TEQEEDLIYR MYRLVGDRWA LIAGRIPGRK  60
PEEIERFWLM RHGEGFAEKR EAEANDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53200.12e-32MYB_related family protein