PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR93372.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family SBP
Protein Properties Length: 183aa    MW: 20737.2 Da    PI: 9.7937
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR93372.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP135.12.2e-4261137278
                 -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
         SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                 Cq+e+C++dl++ak+yhrrhkvCe+hsk+pvv+v+gl+qrfCqqCsrfhelsefDe+krsCrrrLa+hnerrrk+++
  RWR93372.1  61 CQAEKCAVDLTDAKRYHRRHKVCEQHSKSPVVIVAGLRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKNSS 137
                 **************************************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MESKAEAKEK AKKEVFEDEK EDEEDGGGAA TEDEKKKRVT ATAASPSLKK GGMNHLQAPS  60
CQAEKCAVDL TDAKRYHRRH KVCEQHSKSP VVIVAGLRQR FCQQCSRFHE LSEFDEAKRS  120
CRRRLAGHNE RRRKNSSESH LEGSSRRAVG PQLKENHCRQ ADQSGRTQLT LPGSPPYKHF  180
QIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53160.13e-44SBP family protein