PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR93591.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 360aa MW: 41022.8 Da PI: 6.0994

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR93591.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.4	8e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTteEd++l+d+++++G g+W+t ++ g+ R++k+c++rw +yl RWR93591.1 14 KGPWTTEEDQKLLDYIQKHGHGSWRTLPKNAGLARCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	56.7	5.6e-18	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr+T eE+e ++++++ lG++ W++Ia++++ gRt++++k++w+++ RWR93591.1 67 RGRFTFEEEEAIIQLHRILGNK-WSAIAARLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MGRTPCCDKN GQKKGPWTTE EDQKLLDYIQ KHGHGSWRTL PKNAGLARCG KSCRLRWTNY 60 LRPDIKRGRF TFEEEEAIIQ LHRILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPVTHNPRL DLLDLSSVLS SSIYNPFQLH LSRLLGIDPM INSELLRLAS NLLSSQHENP 180 NQFLQDLQEN QFSSPQIQNQ STSFQAQQLQ NPIQEIPSCT TSNTFLSETQ LVQANVHQLP 240 TSNMYQENGM ICNLDQNFEQ IMNNGYYNSE QSVMDPFSEN SNFQANDNQN LSFSSVLSTP 300 ASSPTTLNSS SMYLNSSTSP TPLNSTSTQI NSGAEDERDS YCSNMLKFEI PDLLDMREFM

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MGRTPCCDKN GQKKGPWTTE EDQKLLDYIQ KHGHGSWRTL PKNAGLARCG KSCRLRWTNY  60
LRPDIKRGRF TFEEEEAIIQ LHRILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG  120
IDPVTHNPRL DLLDLSSVLS SSIYNPFQLH LSRLLGIDPM INSELLRLAS NLLSSQHENP  180
NQFLQDLQEN QFSSPQIQNQ STSFQAQQLQ NPIQEIPSCT TSNTFLSETQ LVQANVHQLP  240
TSNMYQENGM ICNLDQNFEQ IMNNGYYNSE QSVMDPFSEN SNFQANDNQN LSFSSVLSTP  300
ASSPTTLNSS SMYLNSSTSP TPLNSTSTQI NSGAEDERDS YCSNMLKFEI PDLLDMREFM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	4e-98	MYB family protein