PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR93867.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 277aa MW: 32141.3 Da PI: 8.2786

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR93867.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.1	8.5e-18	18	65	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd +l+++++ +G g+W+ +a++ g++Rt+k+c++rw++yl RWR93867.1 18 RGPWTIEEDTRLIHYITCHGEGRWNMVAKCSGLKRTGKSCRLRWLNYL 65 89********************************************97 PP
2	Myb_DNA-binding	52.9	8.8e-17	71	114	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ ++eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++ RWR93867.1 71 RGNLSPEEQLLILELHSKWGNR-WSRIAQHLP-GRTDNEIKNYWRT 114 7899****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MSTVPKECKE GGDVEIRRGP WTIEEDTRLI HYITCHGEGR WNMVAKCSGL KRTGKSCRLR 60 WLNYLKPDVK RGNLSPEEQL LILELHSKWG NRWSRIAQHL PGRTDNEIKN YWRTRVQKQA 120 RQLKIDVNST RFRDTIRCLW IPRLLQKMES SSSPIPSQNP TQILLNSDPL STSEQNTFTK 180 FGSLDKSITE DCSSSITSDS MNITQLTEIS RFPSSPQSFG NIDYDPFLRG FCVDNSYDLQ 240 SMNPTTMSEI NWVDGMEENL WNMDEMWQSR RLQGRGI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68320.1	5e-86	MYB family protein