PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR93870.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 276aa    MW: 31162.9 Da    PI: 5.4527
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR93870.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH261.6e-08170217455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++iN+++  L+el+P +     k +  a +L + ++Y++sLq
  RWR93870.1 170 SHSLAERVRREKINERMRCLQELVPGC----YKTMGMAVMLDEIINYVQSLQ 217
                 8*************************9....35599999**********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MAEFSENLKS FKSSLPFLDM YSSNIEYINQ FTELNATVME NTDYNLHSLM GFSNDNFLTQ  60
QSELTASLNE NLASLHASDC LTSAPIAQSI ASMEDVDQES KKKRKVMTIS ESSSGVTSNP  120
VSESGSGENN KRKRKNSSRR GKNGRSEEKQ DDKLKEVIHV RARRGQATDS HSLAERVRRE  180
KINERMRCLQ ELVPGCYKTM GMAVMLDEII NYVQSLQNQV DFLSMKLSAA SSFYDFSVDM  240
ETTQTPQVTN PYEVFDVERL LREGYGVTSF HPSLPL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1101106KKKRKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25330.13e-53bHLH family protein