PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR93891.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 208aa MW: 23228 Da PI: 6.7646

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR93891.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.2	1.9e-08	13	47	1	36
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS- CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRt 36 +g+W+++Ed++l+d++k G g+W++ ++ g+t RWR93891.1 13 KGAWSKQEDQKLIDYIKANGEGCWRSLPQAAD-GLT 47 79************************999988.887 PP
2	Myb_DNA-binding	48.9	1.5e-15	60	100	6	48
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l RWR93891.1 60 EDEEDLIIKLHALLGNR-WSLIAGRLP-GRTDNEVKNYWNSHL 100 89*************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence
MRKPCCEKVE TNKGAWSKQE DQKLIDYIKA NGEGCWRSLP QAADGLTICG QTSREATFLE 60 DEEDLIIKLH ALLGNRWSLI AGRLPGRTDN EVKNYWNSHL RRKLINMGID PNNHRLNHTL 120 PPRQRQHGSN STSSSGSKSQ VCEPCDQQMK SQGDNDQVSD AASCLNDESC SLPDLNLDLT 180 KTTSSPLTTA PEMKQHEPKA TPTLLLFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38620.1	1e-56	MYB family protein