PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR93933.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 192aa MW: 22173.8 Da PI: 8.4725

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR93933.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.8	2.9e-19	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTteEd++l+++++ +G g W+t ar g++Rt+k+c++rw++yl RWR93933.1 15 KGPWTTEEDLILINYIANHGEGVWNTLARSAGLKRTGKSCRLRWLNYL 62 79********************************************97 PP
2	Myb_DNA-binding	55.5	1.3e-17	68	111	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l+ ++++++G++ W++Iar+++ gRt++++k++w++ RWR93933.1 68 RGNITPEEQLLIMELHARWGNR-WSKIARHLP-GRTDNEIKNYWRT 111 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 192 aa Download sequence
MDKKTCNSQE VDVRKGPWTT EEDLILINYI ANHGEGVWNT LARSAGLKRT GKSCRLRWLN 60 YLRPDVRRGN ITPEEQLLIM ELHARWGNRW SKIARHLPGR TDNEIKNYWR TRIQKKIKQA 120 ETFTNQNFDA TQNAGTSYSS GPSDGVQPCS PMYNMNNNNI DPMVTPMSTE SNESFWSMSM 180 EDLWSSHLFS AD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27810.1	2e-76	MYB family protein