PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR93956.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 132aa    MW: 14887.2 Da    PI: 8.4981
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR93956.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.61.3e-091360553
                HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHH CS
         HLH  5 hnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIks 53
                 +++E++RR ++++  +eL +l+P+     ps+  ls  +  e+A +YIk+
  RWR93956.1 13 RKAVEKNRRIHMKNLCSELSSLIPPeH---PSRVaLSQQDSFEQAADYIKK 60
                579**********************66...77778**************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
MKRSDASTPK LERKAVEKNR RIHMKNLCSE LSSLIPPEHP SRVALSQQDS FEQAADYIKK  60
TEERIKELKR KRDSVMDVEG RNRDMSGGMM MGLRLPIVEL SESGSILKVV MISGLDNNVM  120
LSDIITVLEE GS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.19e-19bHLH family protein