PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR93957.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 176aa    MW: 19846.8 Da    PI: 9.1516
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR93957.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH231.4e-071460653
                HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
         HLH  6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53
                + +E++RR ++++   eL +l+P++ +++   ls  +  e+A +YIk+
  RWR93957.1 14 KTVEKNRRIHMKNICRELVSLIPPQ-HQSRVPLSQQDSFEQAADYIKK 60
                689*********************6.356666**************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MKRGQASGPK LERKTVEKNR RIHMKNICRE LVSLIPPQHQ SRVPLSQQDS FEQAADYIKK  60
TEQRINELKR KRDLVMAAEG INNDTIGKMV TGFRLPVVEL SDLGPILKVV LISGLENNVM  120
LSDVITVLEE EGAEVVSANQ YSVADSCFHV LHSQVSSSRV GYESERVQKR LKDLVH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.12e-28bHLH family protein