PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR93977.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 202aa MW: 23237.9 Da PI: 6.8583

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR93977.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.1	4.2e-18	8	55	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd++l+d+v ++G+g+W++I++t g++R +k+c++rw +yl RWR93977.1 8 KGLWTAEEDKILIDYVGEHGKGRWNRISKTTGLKRFGKSCRLRWMNYL 55 678***************************99**********97 PP
2	Myb_DNA-binding	62	1.2e-19	61	106	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++l+++++++lG++ W++Ia +++ gRt++q+k++w+++l RWR93977.1 61 RGNFTEEEEDLIIRLHNLLGNR-WSLIAGRVP-GRTDNQVKNHWNSHL 106 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MGENEYKKGL WTAEEDKILI DYVGEHGKGR WNRISKTTGL KRFGKSCRLR WMNYLRPGVN 60 RGNFTEEEED LIIRLHNLLG NRWSLIAGRV PGRTDNQVKN HWNSHLSKKL MMKKDEENTS 120 HSSMSLPQEG QGENHHHLLQ EATNSNTNSH PSFSAICGEM GPQSKDCPER TASALDLSSS 180 FWFSNDDFYL NNHGLMDLLD EY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G40330.1	3e-69	MYB family protein