PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR93988.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NF-YB
Protein Properties Length: 151aa    MW: 16964.3 Da    PI: 4.3972
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR93988.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB72.95.2e-23890385
       NF-YB  3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkv 85
                ++d  lP a + +i+k++lP + ++++da++++ ec +efi +++se+++ c++e+++ti+++ ++ al  lGf +y+e++ +
  RWR93988.1  8 KEDVSLPKATMFKIIKEMLPPDVRVARDAQDLLVECCVEFINLISSESNEVCNQEDKRTIAPEHVIKALQVLGFGEYIEEVYA 90
                68999**************************************************************************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MDIVGKSKED VSLPKATMFK IIKEMLPPDV RVARDAQDLL VECCVEFINL ISSESNEVCN  60
QEDKRTIAPE HVIKALQVLG FGEYIEEVYA AYEQHKLETL DSPKGGKWTA AAEMTEEEAL  120
AEQQRMFAEA RARMNGTSIP KQLDSDRSIE S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23090.46e-80NF-YB family protein