PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR94138.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NF-YB
Protein Properties Length: 143aa    MW: 15771.8 Da    PI: 6.2547
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR94138.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB163.33.3e-5126121297
       NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 
                 +eqd +lPianv+rimk++lP nakisk+aket+qecvsefi+fvt+ea dkc++ekrkt+ng+d++wal+ lGf+dy++pl+ yl+kyre+ gek
  RWR94138.1  26 KEQDLLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFIGFVTGEACDKCHKEKRKTVNGEDICWALGILGFDDYAQPLRRYLHKYREVVGEK 121
                 89******************************************************************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MAESHNFGVT STASSSNTTS GDGCIKEQDL LLPIANVGRI MKQILPPNAK ISKEAKETMQ  60
ECVSEFIGFV TGEACDKCHK EKRKTVNGED ICWALGILGF DDYAQPLRRY LHKYREVVGE  120
KANLRNMGDT KNGNDESPIF GTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.19e-58NF-YB family protein