PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR94196.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 226aa    MW: 25194.4 Da    PI: 9.0133
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR94196.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2667.7e-2171120356
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                 y+GVr+++ +g+W+AeIrdp+    + +r++lg+f ta+eAa a+++a+kk++g+
  RWR94196.1  71 YRGVRQRP-WGKWAAEIRDPV----KgARVWLGTFNTAQEAAMAYDHAAKKIRGH 120
                 9*******.**********75....44**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MCGGAIISDL LLLDFKDNIG ACGDLDQTSF KPEGLIQSLS AGKQGNISSK NRVPKGAEEK  60
KKKKRALKHL YRGVRQRPWG KWAAEIRDPV KGARVWLGTF NTAQEAAMAY DHAAKKIRGH  120
KAKLNFPLTK PTPTNSVPNS DIPNPNSLTR PNVNYLYQEL SFPKEEPNPP SFQSFSEMDT  180
NVGWNERISS LESFLGLDHE SGESVTSDYS VDVWLSDDAV TRHLFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.15e-36ERF family protein