PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR94235.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family GATA
Protein Properties Length: 134aa    MW: 14964.4 Da    PI: 10.1258
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR94235.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA62.55.1e-203165135
        GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                C+ C+ttkTplWR gp g+k+LCnaCG++yrkk++
  RWR94235.1 31 CADCRTTKTPLWRGGPAGPKSLCNACGIRYRKKRR 65
                ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    
MQKLESRDSD GKHPGAVSTE MNQLNDLKRC CADCRTTKTP LWRGGPAGPK SLCNACGIRY  60
RKKRRAMLGL NNREEKEKKE RGKHKLGVSF KLRLLSLGRD VSLESCLLQK DRKLAEEEEA  120
AVLLMALSCG FAST
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16283KKRRAMLGLNNREEKEKKERGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.15e-26GATA family protein