PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR94289.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family GRAS
Protein Properties Length: 139aa    MW: 15904.3 Da    PI: 4.6679
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR94289.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS102.65.6e-321137239374
        GRAS 239 vvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqa 337
                 ++v+e e +hn +sF +rf++ l yysa+fd+l++ + r++ +r+ vE  + +  i+ ++a+eg+e+   +     Wr+ ++++GF++ +ls++  +qa
  RWR94289.1   1 MIVTEVEENHNLPSFINRFTKVLFYYSAMFDCLDTCMDRNDTNRMLVEDNFCSLGIRCMIATEGSESMVMNVGIDVWRSFFKRFGFEETELSQQSLDQA 99 
                 6899*********************************************************************************************** PP

        GRAS 338 klllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +l++++v+ +  +++  + ++l+ gW++ pL+ vSaW+
  RWR94289.1 100 NLVVKQVAyGSCFTLGMNGKALTVGWRGAPLFYVSAWK 137
                 ********9999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MIVTEVEENH NLPSFINRFT KVLFYYSAMF DCLDTCMDRN DTNRMLVEDN FCSLGIRCMI  60
ATEGSESMVM NVGIDVWRSF FKRFGFEETE LSQQSLDQAN LVVKQVAYGS CFTLGMNGKA  120
LTVGWRGAPL FYVSAWKLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55580.11e-20GRAS family protein