PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR94292.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family GRAS
Protein Properties Length: 103aa    MW: 11475.4 Da    PI: 8.4993
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR94292.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS53.16.4e-173101277374
        GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +++ +r+ vE+ +l++ i+  +a++g+er  r+     Wr+ ++++GF + +ls++  +qa+l++++v+ +   + + + ++l+ gWk+ pL+sv aW+
  RWR94292.1   3 KNDTNRMLVEEDFLSQGIRCKIATAGSERMIRCVGIDVWRSFIKRFGFVETALSQRSLDQANLVIKQVAcGSCCTDDMNGKALTVGWKGAPLLSVPAWK 101
                 56789****************************************************************555455555566677**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 103 aa     Download sequence    
MDKNDTNRML VEEDFLSQGI RCKIATAGSE RMIRCVGIDV WRSFIKRFGF VETALSQRSL  60
DQANLVIKQV ACGSCCTDDM NGKALTVGWK GAPLLSVPAW KLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55580.15e-11GRAS family protein