PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR94294.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family WRKY
Protein Properties Length: 240aa    MW: 27470.3 Da    PI: 5.3945
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR94294.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY962.6e-3053111259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+ver+++d ++++itY+++Hnh+
  RWR94294.1  53 SDFWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERCRTDASMLIITYTSSHNHP 111
                 699***********************9988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MEDSSITRTD LKSFKETRKE NQPSKRRKVV EKTVVTVKIE ENVGKQKGEG PPSDFWSWRK  60
YGQKPIKGSP YPRGYYRCST SKGCSAKKQV ERCRTDASML IITYTSSHNH PGPCVHTNPT  120
QEPQQIQPSE NPPNSPQQQQ QQQLQPIKNE EDISESFHFQ SPINSSDDVH QETPLTVLDE  180
THDPTNLLFD EEPLSYPHTM TFSSSKSEDN DFFDELEELP ISSSFASLVR SSFFDERILV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.12e-35WRKY family protein