PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR94353.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 289aa MW: 33167.2 Da PI: 6.9885

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR94353.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.5	7.6e-19	23	70	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd++lv++++ +G g+W++ ar+ g++Rt+k+c++rw++yl RWR94353.1 23 RGPWTMEEDLILVNYIADHGEGRWNSLARCAGLKRTGKSCRLRWLNYL 70 89********************************************97 PP
2	Myb_DNA-binding	54.2	3.3e-17	76	119	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++ RWR94353.1 76 RGNITPEEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 119 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence
MDGHGRGGCS SETQSEEEMD LRRGPWTMEE DLILVNYIAD HGEGRWNSLA RCAGLKRTGK 60 SCRLRWLNYL RPDVRRGNIT PEEQLLILEL HSRWGNRWSK IAQHLPGRTD NEIKNYWRTR 120 VQKHAKQLKC DVNSKQFKDA MRYLWMPRLV ERIRAASAAS GSTQNTPTTL QNLPAYQPLT 180 SICNDFGVPQ VKPNITPENS STDSFVTTNT HVVSPISDLT DYYFHGNHNG FQTAPVSCPE 240 SLLSPSGSFY HGFELPPTEQ NVWFGMDPPE NTWNMEDIWL LQQQQQQMC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49620.1	3e-95	MYB family protein