PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR94459.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 119aa    MW: 13178.8 Da    PI: 7.67
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR94459.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding248.9e-081660344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     +WT+   + + +a + + ++   +W+ +a+++g g+t +++k ++
       RWR94459.1 16 SWTAKQNKAFERALAIFDKDtpdRWENVASMVGGGKTVEEVKRHY 60
                     7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    
MASLSLSSSS SSYSSSWTAK QNKAFERALA IFDKDTPDRW ENVASMVGGG KTVEEVKRHY  60
DILVEDLKCI ESGQVPFPNY KPTPGPGPGP THPKTNSNKP SSLPNDDDHH RLMMYLKLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.11e-32MYB_related family protein