PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR94517.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family C3H
Protein Properties Length: 167aa    MW: 18583.1 Da    PI: 8.583
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR94517.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH27.94.1e-0998120527
                 --SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH   5 lCrffartGtCkyGdrCkFaHgp 27 
                  C++f rtG+C+yGd+Ck+ H++
  RWR94517.1  98 VCNHFVRTGFCQYGDSCKYFHPK 120
                 6********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MPLGKYYCDY CDKQFQDTPS ARRRHLQGIQ HQRAKALWYD SFNLNGNLST SLLSLAFPQT  60
LGVHISPQEI YCSLNGVFLL FASSDQQRLQ AHALGKGVCN HFVRTGFCQY GDSCKYFHPK  120
PNTQIPTQAI PGNVARDSVG ISLGNLPPSL RPPPEGGYLP LPFVDWG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26749.18e-36C3H family protein