PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR94526.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 239aa MW: 27057.2 Da PI: 7.8753

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR94526.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.2	3.9e-18	22	69	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd +lv++++ +G g+W++ ar+ g++Rt+k+c++rw++yl RWR94526.1 22 RGPWTIEEDVILVNYIAIHGAGRWNLLARCAGLRRTGKSCRLRWLNYL 69 89********************************************97 PP
2	Myb_DNA-binding	52.1	1.6e-16	75	118	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++ RWR94526.1 75 RGNITVEEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 118 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MDAHGRGCSL ITGRDEGKDM RRGPWTIEED VILVNYIAIH GAGRWNLLAR CAGLRRTGKS 60 CRLRWLNYLC PDVRRGNITV EEQLLILELH SRWGNRWSKI AQHLPGRTDN EIKNYWRTRV 120 KKQANHLKCD PNTKQFNDAM LHLWTRFRAA SASPSGSHHN PTTTHQNLTA GQACPAPPVH 180 SSIGATSDFH GNDTDCQVAH VSSLESWTSP SGWFDHEQNW GFDGDILGST WDMEEFGFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G48000.1	3e-70	MYB family protein