PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR94527.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 248aa MW: 28400.4 Da PI: 7.6877

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR94527.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.5	3.5e-19	22	69	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd +lv++++++G g+W++ ar+ g++Rt+k+c++rw++yl RWR94527.1 22 RGPWTIEEDIILVNYIAKHGEGRWNSLARCAGLRRTGKSCRLRWLNYL 69 89********************************************97 PP
2	Myb_DNA-binding	51.8	1.8e-16	75	118	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++ RWR94527.1 75 RGNITLEEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 118 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MDAHGRGCSF GTGRDEEEDM RRGPWTIEED IILVNYIAKH GEGRWNSLAR CAGLRRTGKS 60 CRLRWLNYLR PDVRRGNITL EEQLLILELH SRWGNRWSKI AQHLPGRTDN EIKNYWRTRV 120 QKQANHLKCD PNTKQFKDAM LHLWIRFWAA SATPSGSHHN PTTTHQNLTD GQACLPTPAH 180 SNMGATSDFR DSDLHGNETN QQTAQVSSLE SMTSPSGYFN HEHNLGFGGD TWASTWNMEE 240 FGFAQQQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49620.1	1e-72	MYB family protein