PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR94591.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 362aa MW: 40647.3 Da PI: 4.8695

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR94591.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.1	6.6e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgrWT+eEde+l +++ G g+W++ ++ g+ R++k+c++rw +yl RWR94591.1 14 RGRWTAEEDEILMTYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 8*****************************99**********97 PP
2	Myb_DNA-binding	53.3	6.1e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ ++eE+e++++++ +G++ W++Ia +++ gRt++++k++w+++l RWR94591.1 67 RGNISPEEEEIIIKLHGSYGNR-WSLIAGHLP-GRTDNEIKNYWNSHL 112 7899****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MGRAPCCEKV GLKRGRWTAE EDEILMTYIQ ANGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRADLKRGNI SPEEEEIIIK LHGSYGNRWS LIAGHLPGRT DNEIKNYWNS HLSRRIHTFR 120 RHNNDGAPVV VDIGKITGGC KRTGGRTGRS AMKKKNPNVQ MRRENPYPST TPLLKREALK 180 DVSKQNDKKE NMVKNSYQAN EVVMGTCQVS VNDVLNPHEG AESGLSDVRV GMEGGPEGST 240 EERGIGGLAP NDDQRENEVM GSNEESKENG GVLGVMDGRC ESGMGIDWCS SLDACFEEME 300 DLQVELLGWE WEGMEEKKCE EEGGDLWSWL WGSDNEEEFQ AMGSREQEKY ADWLLSAETN 360 DL

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MGRAPCCEKV GLKRGRWTAE EDEILMTYIQ ANGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LRADLKRGNI SPEEEEIIIK LHGSYGNRWS LIAGHLPGRT DNEIKNYWNS HLSRRIHTFR  120
RHNNDGAPVV VDIGKITGGC KRTGGRTGRS AMKKKNPNVQ MRRENPYPST TPLLKREALK  180
DVSKQNDKKE NMVKNSYQAN EVVMGTCQVS VNDVLNPHEG AESGLSDVRV GMEGGPEGST  240
EERGIGGLAP NDDQRENEVM GSNEESKENG GVLGVMDGRC ESGMGIDWCS SLDACFEEME  300
DLQVELLGWE WEGMEEKKCE EEGGDLWSWL WGSDNEEEFQ AMGSREQEKY ADWLLSAETN  360
DL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47460.1	3e-74	MYB family protein