PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR94625.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 219aa    MW: 25263 Da    PI: 10.6027
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR94625.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.36e-2176127156
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                 s y+GVr ++ +g+W+AeIrdp++    +r++lg++ taeeAa a+++a+ +++g+
  RWR94625.1  76 SLYRGVRKRP-WGKWAAEIRDPRK---GARVWLGTYSTAEEAAMAYDEAAMRIRGH 127
                 57********.**********954...4**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MCGGAVISDF IAVKRCWKLT PHELWSEFDA FSDLRLLDSN NSAPTGKDGK TRETPVEKVT  60
NVNSGGKKKK EKERKSLYRG VRKRPWGKWA AEIRDPRKGA RVWLGTYSTA EEAAMAYDEA  120
AMRIRGHKAK LNFPAQPNKP CFPDSVSTSQ TWKSLTGIFL KCQVEISFQK CHIFQRWNLI  180
HHYHFRASRP LVVLILDSRR ESRAWSLFLG WTMSREFTQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16784KKKKEKERKSLYRGVRKR
26785KKKKEKERKSLYRGVRKRP
36885KKKKEKERKSLYRGVRKR
46886KKKKEKERKSLYRGVRKRP
56987KKKKEKERKSLYRGVRKRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.13e-30ERF family protein