PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR94626.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 271aa    MW: 30826.3 Da    PI: 4.7384
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR94626.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.42e-1953103155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a+++ +++++g
  RWR94626.1  53 SLYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDKEARRIRG 103
                 57********.**********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MCGGAIISDF IPKNRPRRES APDLWKPPFS SSSSEDDIEI SEKNTDKKRK RKSLYRGIRQ  60
RPWGKWAAEI RDPRKGVRVW LGTFNTAEEA ARAYDKEARR IRGKKAKVNF PNEQDQQQQP  120
PNNTHLQKPL PSQQSNPSDN NYNNLPQNLD FGFMGSFDFS QIADFPAVDF DQDRGNAVSG  180
GLHSRSECRE TTLADETKGV VGEIKEENEL QKLSEDLLAF ESCMKFYQIP YLDGDVELQM  240
ASNPVQESDI GELWSFDDVL PPDMVDSLMA F
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14752KKRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.11e-37ERF family protein