PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR94674.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 202aa    MW: 22355.5 Da    PI: 5.0567
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR94674.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.95.1e-183078355
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                + GVr+++ +gr++AeIrdp++   + r++lg+f+ta+eAa a+++a+++++g
  RWR94674.1 30 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAQEAALAYDRAALAMKG 78
                56******.**********965...5************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MGFSLTQPNA PSSHSNERRG RKKQPEPGRF LGVRRRPWGR YAAEIRDPTT KERHWLGTFD  60
TAQEAALAYD RAALAMKGTQ ARTNFIYSGI SSFDTVLIPC DTQNHTTPQP STFLISTQNK  120
PTATQNSPNR ETGQSSFAMS AQAPCVAAAI NNNFLFFDDS SSGNEDDADY EANVVEKGRQ  180
EGDEDWNVDD VLDNLATAKI VY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.18e-34ERF family protein