PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR94682.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 241aa MW: 27519.1 Da PI: 9.3614

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR94682.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	112.6	4.1e-35	16	150	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +GfrF+Ptdeelv +yLk+kv g+ + +++ ++++ykvePw+Lp v++e k +yfF++ ++k + g+++ r++ +g+Wk t d+++l+++ RWR94682.1 16 VGFRFKPTDEELVRYYLKEKVMGRLSPS-RTVVDAEVYKVEPWHLPGvppkhGVDEEAKVYYFFTRCNRKDKAGNKTDRSAGAGFWKVTCGDRPILDSH 113 8*********************9988.78999*******9547755555556677********************************** PP NAM 97 gelvglkktLvfy.....kgrapkgektdWvmheyrl 128 ++ +glk+ Lvf +++ k ++ +W+m+eyrl RWR94682.1 114 KRPIGLKRRLVFIhsrdkLNERVKNKSRNWIMQEYRL 150 *********665442455666789*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MTGSHNTGSS TESNMVGFRF KPTDEELVRY YLKEKVMGRL SPSRTVVDAE VYKVEPWHLP 60 GVPPKHGVDE EAKVYYFFTR CNRKDKAGNK TDRSAGAGFW KVTCGDRPIL DSHKRPIGLK 120 RRLVFIHSRD KLNERVKNKS RNWIMQEYRL PSEKVGGWVL CRIKESNRRV LEERNEDGEN 180 SMGATTGPVE EKQLQESCSG GLYGWNNNVG SMANLFGEEL SHCLEIWPGS STPTTLNKWI 240 H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77450.1	4e-31	NAC family protein