PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR94745.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

bHLH

Protein Properties

Length: 398aa MW: 45010.4 Da PI: 5.5094

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR94745.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.1	2.7e-12	191	242	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P + + ++ + a+i A+e++++L+ RWR94745.1 191 QRMTHIAVERNRRKQMNEHLRVLRSLMPGS---YVQRGDQASIIGGAIEFVRELE 242 79**************************...9***************9995 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MAQRSAYFCW GMGKWCPMAT LPPLPNWAFF SDTDSVKLLL LRLSNHKSPH IITMEKDEEN 60 YSAGLDYPLD KLSFADVMQF ADFGPKLALN QPKVTDGIDP VYFLKFPVLS DKLQDPLLAP 120 PPTIENIDDR FNGVSEDSKA VATFVMDEEE ERDGVETRAS ENASVQLHLH ESKNRKKRPR 180 TVKTTEEVES QRMTHIAVER NRRKQMNEHL RVLRSLMPGS YVQRGDQASI IGGAIEFVRE 240 LEQLLQCLES QKRRRLLGND AAPRPIGDST SMAIQPSQSP LFPPLPLPND ELKLIEFDNG 300 LREETAEIKS CLADVEVKLL GFDAMIKILS RRRPGQLLKT IAALEDLQFN ILHTNITTIE 360 QTVLYSFNIK VAGDSRFTAD DIANSVQQIF NFIHSSTI

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MAQRSAYFCW GMGKWCPMAT LPPLPNWAFF SDTDSVKLLL LRLSNHKSPH IITMEKDEEN  60
YSAGLDYPLD KLSFADVMQF ADFGPKLALN QPKVTDGIDP VYFLKFPVLS DKLQDPLLAP  120
PPTIENIDDR FNGVSEDSKA VATFVMDEEE ERDGVETRAS ENASVQLHLH ESKNRKKRPR  180
TVKTTEEVES QRMTHIAVER NRRKQMNEHL RVLRSLMPGS YVQRGDQASI IGGAIEFVRE  240
LEQLLQCLES QKRRRLLGND AAPRPIGDST SMAIQPSQSP LFPPLPLPND ELKLIEFDNG  300
LREETAEIKS CLADVEVKLL GFDAMIKILS RRRPGQLLKT IAALEDLQFN ILHTNITTIE  360
QTVLYSFNIK VAGDSRFTAD DIANSVQQIF NFIHSSTI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	192	203	RMTHIAVERNRR
2	252	256	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24140.1	1e-120	bHLH family protein