PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR94776.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family HSF
Protein Properties Length: 234aa    MW: 27235.2 Da    PI: 10.0137
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR94776.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind108.74.2e-34271191102
                   HHHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXX CS
  HSF_DNA-bind   1 aFlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelleki 97 
                   +Fl k+++++ed+ ++++isw+++g++f+v+ + e+a+++Lp+ Fkhsnf+SFvRQLn+YgF+kv + +         weF+h+ F++g+++ll++i
    RWR94776.1  27 SFLLKTHTLVEDPPTNDIISWNDQGTTFIVWRPVELARDLLPTLFKHSNFSSFVRQLNTYGFRKVASGR---------WEFHHNMFRRGERQLLCEI 114
                   59***************************************************************9988.........******************* PP

                   XXXXX CS
  HSF_DNA-bind  98 krkks 102
                   +r+k 
    RWR94776.1 115 QRRKA 119
                   **985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MNKEVCMKHA CVKSASSEHV KRATPPSFLL KTHTLVEDPP TNDIISWNDQ GTTFIVWRPV  60
ELARDLLPTL FKHSNFSSFV RQLNTYGFRK VASGRWEFHH NMFRRGERQL LCEIQRRKAW  120
DSKLPQSLVK TTMKESNDHQ RFSSSMSSSP SSYVSLSYEN KRLKRENGDL CVELASTKKK  180
CNELLNLVAF HLNSKKMVVE QRPKLFGVWL DLPQEKRREH EEFSENMSAL SSQC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41690.12e-53HSF family protein