PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR94820.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 271aa    MW: 30400.2 Da    PI: 7.0879
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR94820.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.45.2e-08165211555
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 h+ +Er RR++iN+++  L++l+P +     k +  a +L + ++Y++sLq
  RWR94820.1 165 HSLAERLRREKINEKMRCLQDLVPGC----YKTMGMAVMLDEIINYVQSLQ 211
                 999**********************9....35599999**********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MAEFSENLNS FKTSLPFTDM YSSMEYKNQF TELNMENPTN NLHSLMGFSN DNLQSDQPKF  60
SVFFNHNQTG FFTADCPTVM PIARSIASTE DLNQEMKRKV IKPSATSSGI SSAPGFETGT  120
GEDDTISRKN SSGRGKRGRC NKKQDEKQKE VIHVRARRGQ ATDGHSLAER LRREKINEKM  180
RCLQDLVPGC YKTMGMAVML DEIINYVQSL QNQVEFLSMK LCAASNFCDL SFDKEAEETP  240
QVTNAYEALK LERLARGGHG GFTGFHSTLP V
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1128144RKNSSGRGKRGRCNKKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18400.15e-49bHLH family protein