PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR94927.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 244aa    MW: 27012.8 Da    PI: 10.4165
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR94927.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.87.3e-154393155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                +++ GVr+++ +grWvAe +d      ++ r +lg+f+ aeeAa a++ a++ l+g
  RWR94927.1 43 PKFLGVRQRP-SGRWVAEKKD----SfQKLRLWLGTFDRAEEAAMAYDSAARLLRG 93
                6899******.7******444....3346***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MDFICNPKIT SQIQYPCGSS LTNSPEHTPK KSSKPPNKRN TLPKFLGVRQ RPSGRWVAEK  60
KDSFQKLRLW LGTFDRAEEA AMAYDSAARL LRGRNARTNF PFNGMSMTHK GKCKSILKNP  120
RFRQLLHHAF MKTHEEASFV NAQNPRSLKK RTHGSDSNPF SACVHETMDC ISQSSVSVGG  180
VLGCDGIQER GGICRVSVGG SRVYSTVHVA PSFSASVYQG KGEGEICARG DSITKTFDFF  240
MLMG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1149153KKRTH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.18e-17ERF family protein