PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR95019.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB
Protein Properties Length: 266aa    MW: 30864.8 Da    PI: 5.8497
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR95019.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.54.7e-161360148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEd++lv +++++G ++W+t +++ g+ R++k+c+ rw++yl
       RWR95019.1 13 KGTWSAEEDQILVSYIRRFGYDNWRTLPKRAGLLRCGKSCRFRWLNYL 60
                     799*****************************99************97 PP
2Myb_DNA-binding52.51.1e-1666111148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ ++eE+e++  ++kqlG++ W+ Ia++++ gRt++++k++w+++l
       RWR95019.1  66 RGNYSKEEEEIIDSLHKQLGNR-WSVIAARLP-GRTDNEIKNYWNTHL 111
                      899*******************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MVKACCVKVG LKKGTWSAEE DQILVSYIRR FGYDNWRTLP KRAGLLRCGK SCRFRWLNYL  60
RPDIKRGNYS KEEEEIIDSL HKQLGNRWSV IAARLPGRTD NEIKNYWNTH LKKRKKNQAM  120
TETRQTSIEN SSSSTNKEEF FQPIPAQMIL EYPENDLIFS QSSSSNFASD NGSMAKNIKQ  180
SNEVVVEQFM QSETAHELGT SINFQSLLAE LYTPEEYSLS SFEDPVLQFP LSPLSMGEYD  240
YLPLQYNTEM NILFNNYEEG EMPRTI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112116KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06180.15e-62MYB family protein