PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR95060.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NF-YC
Protein Properties Length: 301aa    MW: 33710.2 Da    PI: 5.3392
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR95060.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC177.81e-55691721101
       NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 
                 ql++fw++q   ie++tdfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdifdflvdiv
  RWR95060.1  69 QLQMFWATQfqeIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 167
                 89*****999999************************************************************************************** PP

       NF-YC  97 prdel 101
                 pr+el
  RWR95060.1 168 PREEL 172
                 **987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MDQQGHGQPP VMGVVSSAAQ IQYGAPSYQA NQMMGPTPPG SVGTPAQLAQ HQLAYQHMHQ  60
QQQQQLQQQL QMFWATQFQE IEQTTDFKNH SLPLARIKKI MKADEDVRMI SAEAPVIFAR  120
ACEMFILELT LRSWNHTEEN KRRTLQKNDI AAAITRTDIF DFLVDIVPRE ELKDEVLGSL  180
PRAGAVPVGG PADAIPYYYA PQVGAPGLIM GKPVVDQSLY VQQAGAYIPQ QMWQQPQQQQ  240
EAEPISLETR CRQGVGTLCL VQQRNPRRSA YEELISSVDF SHLPERGNQG FLFLGSEQTD  300
P
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1142148RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08970.32e-76NF-YC family protein