PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR95137.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 450aa MW: 50103.8 Da PI: 6.8907

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR95137.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.1	3.5e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l + ++q+G g+W+++++ g+ R++k+c++rw +yl RWR95137.1 14 KGLWSPEEDEKLMRHITQYGHGCWSSVPKQAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	43.8	5.8e-14	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E+ l++++++ lG++ W+ Ia+ ++ gRt++++k+ w++ RWR95137.1 67 RGTFSPQEESLIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 899*****************.*****.*******9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence
MGRHSCCYKQ KLRKGLWSPE EDEKLMRHIT QYGHGCWSSV PKQAGLQRCG KSCRLRWINY 60 LRPDLKRGTF SPQEESLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLRQRG 120 IDPNTHKPLS EVENVENKVP TNNENASGSN ELKLLMAAST SSENSKPVVE EQKPPLMVGD 180 RSPVEGFGST INRIVNNSLT PTKDFFLERF VASDESSTSC RPSDSMGYFP LHQLNYSSNF 240 ANQTTSIGLS ANPNPVLWLN QSCRPFEMNS EFNSSTMSTA MPSLSSSILP TSLGIKPIVN 300 LPPANPSISS VNINGIQFWD AGSSSNSGSG SGSGSSSIEL QSNNSFFENG VFPWGLADCR 360 VESSELTPDK EAQIHLQGQS EDIKWSEYVH SSHFSTPVTV QNQNQHLYSG IKTENQFDIN 420 SLSNWHQSQQ QLQASDIYGK DFQRVVLEQI

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence

MGRHSCCYKQ KLRKGLWSPE EDEKLMRHIT QYGHGCWSSV PKQAGLQRCG KSCRLRWINY  60
LRPDLKRGTF SPQEESLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLRQRG  120
IDPNTHKPLS EVENVENKVP TNNENASGSN ELKLLMAAST SSENSKPVVE EQKPPLMVGD  180
RSPVEGFGST INRIVNNSLT PTKDFFLERF VASDESSTSC RPSDSMGYFP LHQLNYSSNF  240
ANQTTSIGLS ANPNPVLWLN QSCRPFEMNS EFNSSTMSTA MPSLSSSILP TSLGIKPIVN  300
LPPANPSISS VNINGIQFWD AGSSSNSGSG SGSGSSSIEL QSNNSFFENG VFPWGLADCR  360
VESSELTPDK EAQIHLQGQS EDIKWSEYVH SSHFSTPVTV QNQNQHLYSG IKTENQFDIN  420
SLSNWHQSQQ QLQASDIYGK DFQRVVLEQI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09540.1	8e-97	MYB family protein