PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR95160.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 103aa    MW: 11925.3 Da    PI: 3.8854
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR95160.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.74.7e-07750344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                      W+ eE +l+  a +        +W+ +a+++g g++++++  ++
       RWR95160.1  7 VWSWEENKLFELALAVVDEQnpdRWNVVAEMVG-GKSAEEVEKHY 50
                     6*********99998888778889*********.*******9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 103 aa     Download sequence    
MQGVCSVWSW EENKLFELAL AVVDEQNPDR WNVVAEMVGG KSAEEVEKHY WILVEDLQCI  60
ESGKLDHAIE EVQLHLPIDC DDCDQLQSWT DEDQKLLVRL DLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.24e-22MYB_related family protein