PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR95200.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 290aa MW: 32945.3 Da PI: 5.1929

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR95200.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.8	1.2e-18	22	69	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd+ lv++++++G g+W++ ar+ g++Rt+k+c++rw++yl RWR95200.1 22 RGPWTIEEDLVLVNYITEHGEGRWNLLARCAGLKRTGKSCRLRWLNYL 69 89********************************************97 PP
2	Myb_DNA-binding	50.7	4.1e-16	75	118	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++ RWR95200.1 75 RGNITLEEQLLILELHSRWGNR-WSKIAQYLP-GRTDNEIKNYWRT 118 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MDAQGRGCDS GTQSEEEMGM RRGPWTIEED LVLVNYITEH GEGRWNLLAR CAGLKRTGKS 60 CRLRWLNYLR PDVRRGNITL EEQLLILELH SRWGNRWSKI AQYLPGRTDN EIKNYWRTRV 120 QKQAKQLKCD VNSKQFKDAM RYVWIPRLLE RIQAAASSSS SSKNNSNNNS TNNTNMDNLS 180 DWETMTQDYD LGGAPVDPDL TQDHSSPGPS SDSIGGTQVV SPVSDMDYYS GEGNNNYNHL 240 QAALTSPHGY FNNNGLDFSV TQQDGWFGRD TNGWSMEDLW AFEQQLCSGI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49620.1	1e-83	MYB family protein