PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR95245.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family WRKY
Protein Properties Length: 242aa    MW: 27369.4 Da    PI: 6.1765
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR95245.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY107.47.1e-34129186259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dgy+WrKYGqK vk+s+fprsYYrCts+ C vkk+vers++dp++v++tYeg+H+h+
  RWR95245.1 129 EDGYRWRKYGQKAVKDSPFPRSYYRCTSHMCGVKKRVERSSDDPTIVVTTYEGQHKHP 186
                 8********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MESFYDEFQP TSAFTSIFDL SGDMGVPGGS SLGFMDLLEL EDFGPSMLDL PPPSTVGMTT  60
ASPTLPPGTP NSSSSNEVGN EYDIKVEVEE EENKSKKELK SEKKKTKKQK REREPQFAFI  120
TKSQVDHLED GYRWRKYGQK AVKDSPFPRS YYRCTSHMCG VKKRVERSSD DPTIVVTTYE  180
GQHKHPNPTV PQPPIPLNSD EVLAGFSSTV DMATLSNHYY HHHHHQQQQP QYIFSSPPSF  240
NF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18170.15e-40WRKY family protein