PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR95310.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NF-YB

Protein Properties

Length: 211aa MW: 23371.7 Da PI: 7.4062

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR95310.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	150.3	3.7e-47	33	116	2	85
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkv 85 +eqdr+lPianv+rimk++lP nak+sk+aket+qecvsefisfvt+easdkc++ekrkt+ngdd++wal+tlGf+dy+e+lk RWR95310.1 33 KEQDRLLPIANVGRIMKQILPPNAKVSKEAKETMQECVSEFISFVTGEASDKCRKEKRKTVNGDDICWALGTLGFDDYAETLKR 116 89******************************************************************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MVNNIGSSPD SESHSYKVGE ATNSGTSGDG CIKEQDRLLP IANVGRIMKQ ILPPNAKVSK 60 EAKETMQECV SEFISFVTGE ASDKCRKEKR KTVNGDDICW ALGTLGFDDY AETLKRCDSI 120 ALHLGNGNHA CKLIDIAQFV GEWQFESCIG PQIKEYPAMV RVVRRGKGFL EAIFGAGCHM 180 GGHLLGQHEI RWYGKEKSYG FLMDSKGMMR W

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	117	ETLKRC
2	113	117	TLKRC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47810.1	5e-52	NF-YB family protein