PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR95367.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 288aa    MW: 31078.4 Da    PI: 6.9491
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR95367.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.61.4e-05161208254
                 HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 r+++    r+RR ri ++   L el+P+a         K ++L  ++++Ik L
  RWR95367.1 161 RASKALSARKRRTRISNGVKALGELVPNA-----IEDGKGAVLDDVIDHIKFL 208
                 66777778********************9.....357899***********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MSGASGHKIP VLSLPLISGG LSANAVVLDQ ARDSSMPPMM EKQGNGDRFI GKPIASHRNP  60
WHKVSGNRVN FLSAWQGLHR SAPAGDVPKG IVLATACSES GKQPVDRHSV NMLKDDESRD  120
LTQQNVDSKK QPVDEKRCTV SQPQSVVTVA IPSFSFNPGC RASKALSARK RRTRISNGVK  180
ALGELVPNAI EDGKGAVLDD VIDHIKFLKL QLKALCQSRL GGEAISDPFL YLEGYGHYIF  240
HEQLIGDPLE EIIGELMETD MAAATELLNS KGLSIIPVDL ANDLIQSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.11e-17bHLH family protein