PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR95369.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 177aa    MW: 19753.2 Da    PI: 9.8526
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR95369.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.29.7e-11249454
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                +h  +Er+RR+++N+ +  Lr+l P     + k+ + a+i+  +ve+Ik+L
  RWR95369.1  2 SHMSVERNRRKQMNENLKVLRSLTPCF---YVKRGDQASIVGGVVEFIKEL 49
                7899**********************9...9******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MSHMSVERNR RKQMNENLKV LRSLTPCFYV KRGDQASIVG GVVEFIKELH QVLQSLESKK  60
RRKSLSPGRS PRPLQAIATP PPDGLLGFEN VNELGACCNS PIADVEAKIC GPNVVLKTVS  120
RQIPGQIVKI ITILESLSFE ILHLNISSMD DNVLYSFVIK VTNYSILFLS ITIRLHV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15963KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.11e-62bHLH family protein